move injection points where they belong

src/main/java/com/commafeed/backend/DatabaseCleaner.java

@@ -1,6 +1,7 @@
 package com.commafeed.backend;
 
 import java.util.Calendar;
+import java.util.List;
 import java.util.concurrent.TimeUnit;
 
 import javax.inject.Inject;
@@ -10,6 +11,9 @@ import org.slf4j.LoggerFactory;
 
 import com.commafeed.backend.dao.FeedDAO;
 import com.commafeed.backend.dao.FeedEntryDAO;
+import com.commafeed.backend.dao.FeedSubscriptionDAO;
+import com.commafeed.backend.model.Feed;
+import com.commafeed.backend.model.FeedSubscription;
 
 public class DatabaseCleaner {
 
@@ -21,6 +25,9 @@ public class DatabaseCleaner {
 	@Inject
 	FeedEntryDAO feedEntryDAO;
 
+	@Inject
+	FeedSubscriptionDAO feedSubscriptionDAO;
+
 	public long cleanFeedsWithoutSubscriptions() {
 
 		long total = 0;
@@ -48,4 +55,19 @@ public class DatabaseCleaner {
 		log.info("cleanup done: {} entries deleted", total);
 		return total;
 	}
+
+	public void mergeFeeds(Feed into, List<Feed> feeds) {
+		for (Feed feed : feeds) {
+			if (into.getId().equals(feed.getId())) {
+				continue;
+			}
+			List<FeedSubscription> subs = feedSubscriptionDAO.findByFeed(feed);
+			for (FeedSubscription sub : subs) {
+				sub.setFeed(into);
+			}
+			feedSubscriptionDAO.saveOrUpdate(subs);
+			feedDAO.delete(feed);
+		}
+		feedDAO.saveOrUpdate(into);
+	}
 }

src/main/java/com/commafeed/backend/services/FeedService.java

@@ -1,7 +1,5 @@
 package com.commafeed.backend.services;
 
-import java.util.List;
-
 import javax.ejb.Lock;
 import javax.ejb.LockType;
 import javax.ejb.Singleton;
@@ -13,7 +11,6 @@ import com.commafeed.backend.dao.FeedDAO;
 import com.commafeed.backend.dao.FeedSubscriptionDAO;
 import com.commafeed.backend.feeds.FeedUtils;
 import com.commafeed.backend.model.Feed;
-import com.commafeed.backend.model.FeedSubscription;
 
 @Singleton
 public class FeedService {
@@ -39,19 +36,4 @@ public class FeedService {
 		return feed;
 	}
 
-	public void mergeFeeds(Feed into, List<Feed> feeds) {
-		for (Feed feed : feeds) {
-			if (into.getId().equals(feed.getId())) {
-				continue;
-			}
-			List<FeedSubscription> subs = feedSubscriptionDAO.findByFeed(feed);
-			for (FeedSubscription sub : subs) {
-				sub.setFeed(into);
-			}
-			feedSubscriptionDAO.saveOrUpdate(subs);
-			feedDAO.delete(feed);
-		}
-		feedDAO.saveOrUpdate(into);
-	}
-
 }

src/main/java/com/commafeed/frontend/rest/resources/AbstractResourceREST.java

@@ -1,5 +1,6 @@
 package com.commafeed.frontend.rest.resources;
 
+import javax.inject.Inject;
 import javax.ws.rs.GET;
 import javax.ws.rs.core.Application;
 import javax.ws.rs.core.Context;
@@ -11,6 +12,7 @@ import javax.ws.rs.core.UriInfo;
 import org.apache.commons.lang.StringUtils;
 
 import com.commafeed.backend.model.UserRole.Role;
+import com.commafeed.backend.services.ApplicationSettingsService;
 import com.commafeed.frontend.SecurityCheck;
 import com.commafeed.frontend.model.Entries;
 import com.commafeed.frontend.model.request.MarkRequest;
@@ -25,6 +27,9 @@ import com.wordnik.swagger.jaxrs.JaxrsApiReader;
 @SecurityCheck(Role.USER)
 public abstract class AbstractResourceREST extends AbstractREST {
 
+	@Inject
+	ApplicationSettingsService applicationSettingsService;
+
 	@GET
 	@SecurityCheck(value = Role.NONE)
 	@ApiOperation(value = "Returns information about API parameters", responseClass = "com.wordnik.swagger.core.Documentation")

src/main/java/com/commafeed/frontend/rest/resources/AdminREST.java

@@ -17,13 +17,23 @@ import javax.ws.rs.core.Response.Status;
 
 import org.apache.commons.lang.StringUtils;
 
+import com.commafeed.backend.DatabaseCleaner;
+import com.commafeed.backend.MetricsBean;
 import com.commafeed.backend.StartupBean;
+import com.commafeed.backend.dao.FeedDAO;
+import com.commafeed.backend.dao.UserDAO;
+import com.commafeed.backend.dao.UserRoleDAO;
+import com.commafeed.backend.feeds.FeedRefreshTaskGiver;
+import com.commafeed.backend.feeds.FeedRefreshUpdater;
+import com.commafeed.backend.feeds.FeedRefreshWorker;
 import com.commafeed.backend.model.ApplicationSettings;
 import com.commafeed.backend.model.Feed;
 import com.commafeed.backend.model.User;
 import com.commafeed.backend.model.UserRole;
 import com.commafeed.backend.model.UserRole.Role;
 import com.commafeed.backend.services.FeedService;
+import com.commafeed.backend.services.PasswordEncryptionService;
+import com.commafeed.backend.services.UserService;
 import com.commafeed.frontend.SecurityCheck;
 import com.commafeed.frontend.model.UserModel;
 import com.commafeed.frontend.model.request.FeedMergeRequest;
@@ -44,6 +54,36 @@ public class AdminREST extends AbstractResourceREST {
 	@Inject
 	FeedService feedService;
 
+	@Inject
+	UserService userService;
+
+	@Inject
+	UserDAO userDAO;
+
+	@Inject
+	UserRoleDAO userRoleDAO;
+
+	@Inject
+	FeedDAO feedDAO;
+
+	@Inject
+	MetricsBean metricsBean;
+
+	@Inject
+	DatabaseCleaner cleaner;
+
+	@Inject
+	FeedRefreshWorker feedRefreshWorker;
+
+	@Inject
+	FeedRefreshUpdater feedRefreshUpdater;
+
+	@Inject
+	FeedRefreshTaskGiver taskGiver;
+
+	@Inject
+	PasswordEncryptionService encryptionService;
+
 	@Path("/user/save")
 	@POST
 	@ApiOperation(value = "Save or update a user", notes = "Save or update a user. If the id is not specified, a new user will be created")
@@ -233,7 +273,7 @@ public class AdminREST extends AbstractResourceREST {
 			feeds.add(feed);
 		}
 
-		feedService.mergeFeeds(into, feeds);
+		cleaner.mergeFeeds(into, feeds);
 		return Response.ok().build();
 	}
 

src/main/java/com/commafeed/frontend/rest/resources/ApiDocumentationREST.java

@@ -1,11 +1,13 @@
 package com.commafeed.frontend.rest.resources;
 
+import javax.inject.Inject;
 import javax.ws.rs.GET;
 import javax.ws.rs.Path;
 import javax.ws.rs.core.Application;
 import javax.ws.rs.core.Context;
 import javax.ws.rs.core.Response;
 
+import com.commafeed.backend.services.ApplicationSettingsService;
 import com.commafeed.frontend.model.Entries;
 import com.commafeed.frontend.model.request.MarkRequest;
 import com.wordnik.swagger.annotations.Api;
@@ -21,6 +23,9 @@ public class ApiDocumentationREST extends AbstractREST {
 
 	public static final String API_VERSION = "1.0";
 
+	@Inject
+	ApplicationSettingsService applicationSettingsService;
+
 	@GET
 	@ApiOperation(value = "Returns list of all available api endpoints", responseClass = "List[DocumentationEndPoint]")
 	public Response getAllApis(@Context Application app) {

src/main/java/com/commafeed/frontend/rest/resources/CategoryREST.java

@@ -7,6 +7,7 @@ import java.util.Date;
 import java.util.List;
 import java.util.Map;
 
+import javax.inject.Inject;
 import javax.ws.rs.DefaultValue;
 import javax.ws.rs.GET;
 import javax.ws.rs.POST;
@@ -22,6 +23,9 @@ import org.apache.commons.lang.StringUtils;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
+import com.commafeed.backend.dao.FeedCategoryDAO;
+import com.commafeed.backend.dao.FeedEntryStatusDAO;
+import com.commafeed.backend.dao.FeedSubscriptionDAO;
 import com.commafeed.backend.model.FeedCategory;
 import com.commafeed.backend.model.FeedEntryStatus;
 import com.commafeed.backend.model.FeedSubscription;
@@ -58,6 +62,15 @@ public class CategoryREST extends AbstractResourceREST {
 	public static final String ALL = "all";
 	public static final String STARRED = "starred";
 
+	@Inject
+	FeedEntryStatusDAO feedEntryStatusDAO;
+
+	@Inject
+	FeedCategoryDAO feedCategoryDAO;
+
+	@Inject
+	FeedSubscriptionDAO feedSubscriptionDAO;
+
 	@Path("/entries")
 	@GET
 	@ApiOperation(value = "Get category entries", notes = "Get a list of category entries", responseClass = "com.commafeed.frontend.model.Entries")

src/main/java/com/commafeed/frontend/rest/resources/EntryREST.java

@@ -2,6 +2,7 @@ package com.commafeed.frontend.rest.resources;
 
 import java.util.List;
 
+import javax.inject.Inject;
 import javax.ws.rs.DefaultValue;
 import javax.ws.rs.GET;
 import javax.ws.rs.POST;
@@ -12,7 +13,9 @@ import javax.ws.rs.core.Response.Status;
 
 import org.apache.commons.lang.StringUtils;
 
+import com.commafeed.backend.dao.FeedEntryStatusDAO;
 import com.commafeed.backend.model.FeedEntryStatus;
+import com.commafeed.backend.services.FeedEntryService;
 import com.commafeed.frontend.model.Entries;
 import com.commafeed.frontend.model.Entry;
 import com.commafeed.frontend.model.request.MarkRequest;
@@ -27,6 +30,12 @@ import com.wordnik.swagger.annotations.ApiParam;
 @Api(value = "/entry", description = "Operations about feed entries")
 public class EntryREST extends AbstractResourceREST {
 
+	@Inject
+	FeedEntryService feedEntryService;
+
+	@Inject
+	FeedEntryStatusDAO feedEntryStatusDAO;
+
 	@Path("/mark")
 	@POST
 	@ApiOperation(value = "Mark a feed entry", notes = "Mark a feed entry as read/unread")

src/main/java/com/commafeed/frontend/rest/resources/FeedREST.java

@@ -8,6 +8,8 @@ import java.util.Comparator;
 import java.util.Date;
 import java.util.List;
 
+import javax.inject.Inject;
+import javax.servlet.http.HttpServletRequest;
 import javax.ws.rs.Consumes;
 import javax.ws.rs.DefaultValue;
 import javax.ws.rs.GET;
@@ -18,6 +20,7 @@ import javax.ws.rs.Produces;
 import javax.ws.rs.QueryParam;
 import javax.ws.rs.WebApplicationException;
 import javax.ws.rs.core.CacheControl;
+import javax.ws.rs.core.Context;
 import javax.ws.rs.core.MediaType;
 import javax.ws.rs.core.Response;
 import javax.ws.rs.core.Response.ResponseBuilder;
@@ -34,14 +37,23 @@ import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
 
 import com.commafeed.backend.StartupBean;
+import com.commafeed.backend.dao.FeedCategoryDAO;
+import com.commafeed.backend.dao.FeedEntryStatusDAO;
+import com.commafeed.backend.dao.FeedSubscriptionDAO;
+import com.commafeed.backend.feeds.FaviconFetcher;
+import com.commafeed.backend.feeds.FeedFetcher;
+import com.commafeed.backend.feeds.FeedRefreshTaskGiver;
 import com.commafeed.backend.feeds.FeedUtils;
 import com.commafeed.backend.feeds.FetchedFeed;
+import com.commafeed.backend.feeds.OPMLExporter;
+import com.commafeed.backend.feeds.OPMLImporter;
 import com.commafeed.backend.model.Feed;
 import com.commafeed.backend.model.FeedCategory;
 import com.commafeed.backend.model.FeedEntryStatus;
 import com.commafeed.backend.model.FeedSubscription;
 import com.commafeed.backend.model.UserRole.Role;
 import com.commafeed.backend.model.UserSettings.ReadingOrder;
+import com.commafeed.backend.services.FeedSubscriptionService;
 import com.commafeed.frontend.SecurityCheck;
 import com.commafeed.frontend.model.Entries;
 import com.commafeed.frontend.model.Entry;
@@ -70,6 +82,39 @@ public class FeedREST extends AbstractResourceREST {
 
 	private static Logger log = LoggerFactory.getLogger(FeedREST.class);
 
+	@Inject
+	StartupBean startupBean;
+
+	@Inject
+	FeedCategoryDAO feedCategoryDAO;
+
+	@Inject
+	FaviconFetcher faviconFetcher;
+
+	@Inject
+	FeedSubscriptionDAO feedSubscriptionDAO;
+
+	@Inject
+	FeedSubscriptionService feedSubscriptionService;
+
+	@Inject
+	FeedFetcher feedFetcher;
+
+	@Inject
+	FeedEntryStatusDAO feedEntryStatusDAO;
+
+	@Inject
+	FeedRefreshTaskGiver taskGiver;
+
+	@Inject
+	OPMLImporter opmlImporter;
+
+	@Inject
+	OPMLExporter opmlExporter;
+
+	@Context
+	private HttpServletRequest request;
+
 	@Path("/entries")
 	@GET
 	@ApiOperation(value = "Get feed entries", notes = "Get a list of feed entries", responseClass = "com.commafeed.frontend.model.Entries")

src/main/java/com/commafeed/frontend/rest/resources/ServerREST.java

@@ -1,5 +1,6 @@
 package com.commafeed.frontend.rest.resources;
 
+import javax.inject.Inject;
 import javax.ws.rs.GET;
 import javax.ws.rs.Path;
 import javax.ws.rs.Produces;
@@ -7,7 +8,9 @@ import javax.ws.rs.QueryParam;
 import javax.ws.rs.core.Response;
 import javax.ws.rs.core.Response.Status;
 
+import com.commafeed.backend.HttpGetter;
 import com.commafeed.backend.HttpGetter.HttpResult;
+import com.commafeed.backend.StartupBean;
 import com.commafeed.backend.feeds.FeedUtils;
 import com.commafeed.frontend.model.ServerInfo;
 import com.wordnik.swagger.annotations.Api;
@@ -17,6 +20,12 @@ import com.wordnik.swagger.annotations.ApiOperation;
 @Api(value = "/server", description = "Operations about server infos")
 public class ServerREST extends AbstractResourceREST {
 
+	@Inject
+	StartupBean startupBean;
+
+	@Inject
+	HttpGetter httpGetter;
+
 	@Path("/get")
 	@GET
 	@ApiOperation(value = "Get server infos", notes = "Get server infos", responseClass = "com.commafeed.frontend.model.ServerInfo")

src/main/java/com/commafeed/frontend/rest/resources/UserREST.java

@@ -2,6 +2,7 @@ package com.commafeed.frontend.rest.resources;
 
 import java.util.Arrays;
 
+import javax.inject.Inject;
 import javax.ws.rs.GET;
 import javax.ws.rs.POST;
 import javax.ws.rs.Path;
@@ -11,6 +12,9 @@ import javax.ws.rs.core.Response.Status;
 import org.apache.commons.lang.StringUtils;
 
 import com.commafeed.backend.StartupBean;
+import com.commafeed.backend.dao.UserDAO;
+import com.commafeed.backend.dao.UserRoleDAO;
+import com.commafeed.backend.dao.UserSettingsDAO;
 import com.commafeed.backend.model.User;
 import com.commafeed.backend.model.UserRole;
 import com.commafeed.backend.model.UserRole.Role;
@@ -18,6 +22,8 @@ import com.commafeed.backend.model.UserSettings;
 import com.commafeed.backend.model.UserSettings.ReadingMode;
 import com.commafeed.backend.model.UserSettings.ReadingOrder;
 import com.commafeed.backend.model.UserSettings.ViewMode;
+import com.commafeed.backend.services.PasswordEncryptionService;
+import com.commafeed.backend.services.UserService;
 import com.commafeed.frontend.SecurityCheck;
 import com.commafeed.frontend.model.Settings;
 import com.commafeed.frontend.model.UserModel;
@@ -32,6 +38,24 @@ import com.wordnik.swagger.annotations.ApiParam;
 @Api(value = "/user", description = "Operations about the user")
 public class UserREST extends AbstractResourceREST {
 
+	@Inject
+	UserDAO userDAO;
+
+	@Inject
+	UserSettingsDAO userSettingsDAO;
+
+	@Inject
+	UserRoleDAO userRoleDAO;
+
+	@Inject
+	StartupBean startupBean;
+
+	@Inject
+	UserService userService;
+
+	@Inject
+	PasswordEncryptionService encryptionService;
+
 	@Path("/settings")
 	@GET
 	@ApiOperation(value = "Retrieve user settings", notes = "Retrieve user settings", responseClass = "com.commafeed.frontend.model.Settings")