papers-we-love_papers-we-love/bioinformatics/README.md

Bioinformatics 
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## Sequence Analysis
* [SneakySnake: A Fast and Accurate Universal Genome Pre-Alignment Filter for CPUs, GPUs, and FPGAs (2019)](https://arxiv.org/abs/1910.09020v2)
* [Shouji: a fast and efficient pre-alignment filter for sequence alignment (2019)](https://arxiv.org/ftp/arxiv/papers/1809/1809.07858.pdf)
* [Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping (2015)](https://doi.org/10.1093/bioinformatics/btu856)
Adding Bioinformatics topic (#600) * Create README.md * Rename security/HW Security/README.md to security/hardware_security/README.md * Rearranging files * Rearranging files * Delete sok-eternal-war-in-memory.pdf * Moving sok-eternal-war-in-memory.pdf * Fix dead link Updating the link for "Internet Census via Insecure Routers" * Add Hardware Security subsection * Add Bioinformatics research area * fix the Shouji paper link 2020-03-29 17:13:49 +00:00			`Bioinformatics`
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			`## Sequence Analysis`
			`* [SneakySnake: A Fast and Accurate Universal Genome Pre-Alignment Filter for CPUs, GPUs, and FPGAs (2019)](https://arxiv.org/abs/1910.09020v2)`
			`* [Shouji: a fast and efficient pre-alignment filter for sequence alignment (2019)](https://arxiv.org/ftp/arxiv/papers/1809/1809.07858.pdf)`
			`* [Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping (2015)](https://doi.org/10.1093/bioinformatics/btu856)`