From 87eba1f4b4f593c561bb0ff5ce23434aa1ec654e Mon Sep 17 00:00:00 2001 From: Fares Salem Date: Sat, 28 Mar 2020 16:34:41 +0200 Subject: [PATCH] Add Bioinformatics research area --- bioinformatics/README.md | 6 ++++++ 1 file changed, 6 insertions(+) create mode 100644 bioinformatics/README.md diff --git a/bioinformatics/README.md b/bioinformatics/README.md new file mode 100644 index 0000000..6ce2d5e --- /dev/null +++ b/bioinformatics/README.md @@ -0,0 +1,6 @@ +Bioinformatics +=========== +## Sequence Analysis +* [SneakySnake: A Fast and Accurate Universal Genome Pre-Alignment Filter for CPUs, GPUs, and FPGAs (2019)](https://arxiv.org/abs/1910.09020v2) +* [Shouji: a fast and efficient pre-alignment filter for sequence alignment (2019)](https://doi.org/10.1093/bioinformatics/btz234) +* [Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping (2015)](https://doi.org/10.1093/bioinformatics/btu856) \ No newline at end of file